[1]陈建琴,张振华,邢雨辉,等.光滑异装蟹(Heteropanope glabra)线粒体基因组测定及其在系统发生研究中的意义[J].南京师范大学学报(自然科学版),2018,41(04):108.[doi:10.3969/j.issn.1001-4616.2018.04.017]
 Chen Jianqin,Zhang Zhenhua,Xing Yuhui,et al.The Complete Mitochondrial Genome of Heteropanope Glabraand Implications in Phylogenetic Research[J].Journal of Nanjing Normal University(Natural Science Edition),2018,41(04):108.[doi:10.3969/j.issn.1001-4616.2018.04.017]
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光滑异装蟹(Heteropanope glabra)线粒体基因组测定及其在系统发生研究中的意义()
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《南京师范大学学报》(自然科学版)[ISSN:1001-4616/CN:32-1239/N]

卷:
第41卷
期数:
2018年04期
页码:
108
栏目:
·生命科学·
出版日期:
2018-12-31

文章信息/Info

Title:
The Complete Mitochondrial Genome of Heteropanope Glabraand Implications in Phylogenetic Research
文章编号:
1001-4616(2018)04-0108-07
作者:
陈建琴1张振华1邢雨辉2姚文佳3张晨岭1尤 蕾1
(1.江苏第二师范学院生命科学与化学化工学院 江苏省生物功能分子重点实验室,江苏 南京 210013)(2.南京师范大学中北学院,江苏 南京 210023)(3.南京师范大学生命科学学院,江苏 南京 210023))
Author(s):
Chen Jianqin1Zhang Zhenhua1Xing Yuhui2Yao Wenjia3Zhang Chenling1You Lei1
(1.Jiangsu Key Laboratory of Biofunctional Molecule,School of Life Sciences,Chemistry & Chemical Engineering,Jiangsu Second Normal University,Nanjing 210013,China)(2.College of Zhongbei,Nanjing Normal University,Nanjing 210023,China)(3.School of Li
关键词:
毛刺蟹总科扇蟹总科光滑异装蟹线粒体基因组系统发生
Keywords:
PilumnoideaXanthoideaHeteropanope glabramitochondrial genomephylogeny
分类号:
Q959.223+.63
DOI:
10.3969/j.issn.1001-4616.2018.04.017
文献标志码:
A
摘要:
本文应用高通量测序方法首次测定了光滑异装蟹(Heteropanope glabra)的线粒体基因组全序列. 测序研究发现,光滑异装蟹线粒体基因组全长为16 008 bp,包含典型的蟹类线粒体基因组37条基因,结构紧凑; 其碱基组成的AT含量为70.3%; tRNA二级结构中共有8处错配,且以U/U错配为主. 对线粒体基因排列顺序的比较研究发现,光滑异装蟹独享一种新的基因排列模式; 这种重排模式与同属毛刺蟹总科(Pilumnoidea)的蝙蝠毛刺蟹(Pilumnus vespertilio)相比有一个trnL2(UUR)发生易位,它们彼此之间共享的nad1易位和trnL2(UUR)倒位则提示二者具有最近共同祖先. 这种共享的基因排列顺序为解析毛刺蟹总科(Pilumnoidea)与扇蟹总科(Xanthoidea)的进化关系,并支持将毛刺蟹类从扇蟹总科(Xanthoidea)划分出来提供了独立的分子佐证.
Abstract:
In this study,the mitochondrial genome of Heteropanope glabra was determined firstly by using high-throughput sequencing. The results indicated that the complete mitogenome of H.glabra was 16 008 bp in length,and contained 37 genes with homologues in other brachyuran mitochondrial genomes. The AT nucleotide content of complete mitogenome of H.glabra was 70.3%,the tRNA genes contained 8 unmatched base pairs and the major one was U/U. Comparative analyses of gene order of brachyuran mitogenomes revealed that H.glabra exhibits a novel mitogenomic arrangement pattern,this pattern differed from those found in Pilumnus vespertilio assigned to the same family Pilumnidae(Pilumnoidea)in a translocation of trnL2(UUR),but the shared both translocation of nad1 and inversion of trnL2(UUR)suggested that they are derived from a common ancestor. The rearrangements shared by the two species of the Pilumnoidea differentiated with that found in the Xanthoidea,which consistent with that of brachyuran ground order. Present study provided an independent evidence that supported the separation of pilumnoid crab from Xanthoidea.

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备注/Memo

备注/Memo:
收稿日期:2018-09-12.
基金项目:江苏省自然科学基金(BK20171406)、江苏省高等学校自然科学基金(16KJB170002)、江苏省水产养殖项目(Y2016-29).
通讯联系人:陈建琴,副教授,研究方向:动物学、水生生物学. E-mail:jqchen1102@126.com
更新日期/Last Update: 2018-12-30