[1]赵腾腾,杨雪雨,王亚莉,等.分子模拟研究1,3,4-噻二唑类衍生物对AChE/BChE的生物活性和选择性机理[J].南京师范大学学报(自然科学版),2018,41(01):55.[doi:10.3969/j.issn.1001-4616.2018.01.011]
 Zhao Tengteng,Yang Xueyu,Wang Yali,et al.Studies on Mechanism of Bioactivity and Selectivity of 1,3,4-ThiadiazolInhibitors to AChE/BChE by Molecular Dynamic[J].Journal of Nanjing Normal University(Natural Science Edition),2018,41(01):55.[doi:10.3969/j.issn.1001-4616.2018.01.011]
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分子模拟研究1,3,4-噻二唑类衍生物对AChE/BChE的生物活性和选择性机理()
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《南京师范大学学报》(自然科学版)[ISSN:1001-4616/CN:32-1239/N]

卷:
第41卷
期数:
2018年01期
页码:
55
栏目:
·化学·
出版日期:
2018-03-31

文章信息/Info

Title:
Studies on Mechanism of Bioactivity and Selectivity of 1,3,4-ThiadiazolInhibitors to AChE/BChE by Molecular Dynamic
文章编号:
1001-4616(2018)01-0055-06
作者:
赵腾腾杨雪雨王亚莉朱小蕾
南京工业大学化工学院,材料化学工程国家重点实验室,江苏 南京 210009
Author(s):
Zhao TengtengYang XueyuWang YaliZhu Xiaolei
State Key Laboratory of Materials-Oriented Chemical Engineering,College of Chemical Engineering,Nanjing Tech University,Nanjing 210009,China
关键词:
胆碱酯酶134-噻二唑类抑制剂分子动力学模拟MM-PBSA方法选择性
Keywords:
cholinesterase134-thiadiazol inhibitorsmolecular dynamics simulationMM-PBSA methodselectivity
分类号:
O643.1
DOI:
10.3969/j.issn.1001-4616.2018.01.011
文献标志码:
A
摘要:
乙酰胆碱酯酶(AChE)和丁酰胆碱酯酶(BChE)均属于胆碱酯酶类(ChEs),具有不同的催化特性及抑制模式,是具有高度同源性的两种蛋白质,在神经系统中发挥着重要的作用. 揭示胆碱酯酶抑制剂的选择性机理是开发新型的阿尔茨海默症药物的重要课题. 我们研究了3种1,3,4-噻二唑抑制剂对AChE/BChE的生物活性和选择性机理. 采用MM-PBSA方法对3种抑制剂与AChE/BChE之间的相互作用能进行了计算. 研究结果表明,3种抑制剂对AChE均表现出较高的活性,说明这3种抑制剂能够选择性抑制AChE,所得
Abstract:
Acetylcholinesterase(AChE)and butyrylcholinesterase(BChE)both belonging to the family of cholinesterases(ChEs),which differ in their catalytic properties and inhibition patterns,are highly homologous proteins and play important roles in the cholinergic nervous system. Revealing selectivity mechanism of inhibitors to cholinesterases is an important issue to develop potential Alzheimer’s drugs. In current work,we investigate the bioactivity and selectivity of three 1,3,4-thiadiazol inhibitors to AChE/BChE. The binding interactions between the three inhibitors and AChE/BChE are examined based on the MM-PBSA method. The results demonstrate that three kinds of inhibitors show higher activity to AChE than BChE,and illustrate that the three inhibitors can inhibit AChE selectively. The rank of calculated binding free energies is in good agreement with experimental inhibiting constants of the three inhibitors.

参考文献/References:

[1] CHEN Y,LIN H,YANG H,et al. Discovery of new acetylcholinesterase and butyrylcholinesterase inhibitors through structure-based virtual screening[J]. Rsc advances,2017,7:3 429-3 438.
[2]ZHANG C,DU Q Y,CHEN L D,et al. Design,synthesis and evaluation of novel tacrine-multialkoxybenzene hybrids as multi-targeted compounds against Alzheimer’s disease[J]. European journal of medicinal chemistry,2016,116:200-209.
[3]CHEN X,FANG L,LIU J J,et al. Reaction pathway and free energy profile for butyrylcholinesterase-catalyzed hydrolysis of acetylcholine[J]. Journal of physical chemistry B,2011,115:1 315-1 322.
[4]Di LAZZARO V,OLIVIERO A,PILATO F,et al. Neurophysiological predictors of long term response to AChE inhibitors in AD patients[J]. Journal of neurology,neurosurgery,and psychiatry,2005,76:1 064-1 069.
[5]CAMPS P,FORMOSA X,GALDEANO C,et al. Tacrine-based dual binding site acetylcholinesterase inhibitors as potential disease-modifying anti-Alzheimer drug candidates[J]. Chem Biol Interact,2010,187:411-415.
[6]SUGIMOTO H,YAMANISHI Y,IIMURA Y,et al. Donepezil hydrochloride(E2020)and other acetylcholinesterase inhibitors[J]. Current medicinal chemistry,2000,7:303-339.
[7]MARCO L,do CARMO C,GALANTHAMINE M. A natural product for the treatment of Alzheimer’s disease[J]. Recent patents on CNS drug discovery,2006(1):105-111.
[8]BONO G F,SIM?O S D P,BATISTELA M S,et al. Furtado-alle butyrylcholinesterase:K variant,plasma activity,molecular forms and rivastigmine treatment in Alzheimer’s disease in a Southern Brazilianpopulation[J]. Neurochemistry international,2015,81:57-62.
[9]SKRZYPEK A,MATYSIAK J,NIEWIADOMY A,et al. Synthesis and biological evaluation of 1,3,4-thiadiazole analogues as novel AChE and BuChE inhibitors[J]. European journal of medicinal chemistry,2013,62:311-319.
[10]KRYGER G S I,SUSSMAN J L. Structure of acetylcholinesterase complexed with E2020(Aricept):implications for the design of new anti-Alzheimer drugs[J]. Structure with folding and design,1999.
[11]NICOLET Y,LOCKRIDGE O,MASSON P,et al. Crystal structure of human butyrylcholinesterase and of its complexes with substrate and products[J]. The journal of biological chemistry,2003,278:41 141-41 147.
[12]GARRETT M M,DAVID S G,ROBERT S H,et al. Automated docking using a lamarckian genetic algorithm and an empirical binding free energy function[J]. Journal of computational chemistry,1998,19:1 639-1 662.
[13]CORNELL W D,CIEPLAK P,BAYLY C I,et al. A second generation force field for the simulation of proteins,nucleic acids,and organic molecules[J]. Journal of the American chemical society,1995,117:5 179-5 197.
[14]WANG JM,WOLF R M,CALDWELL J W,et al. Development and testing of a general amber force field[J]. Journal of computational chemistry,2004,25:1 157-1 174.
[15]JORGENSEN W L,CHANDRASEKHAR J,MADURA J D,et al. Comparison of simple potential functions for simulating liquid water[J]. The journal of chemical physics,1983,79:926-935.
[16]ANDERSEN H C. Molecular dynamics simulations at constant pressure and/or temperature[J]. The journal of chemical physics,1980,72:2 384-2 393.
[17]KUMARI R,KUMAR R,LYNN A. g_mmpbsa-a GROMACS tool for high-throughput MM-PBSA Calculations[J]. Journal of chemical information and modeling,2014,54:1 951-1 962.
[18]SAíZ U L,CABRERA M A,FROEYEN M. Exploring the conformational changes of the ATP binding site of gyrase B from Escherichia coli complexed with different established inhibitors by using molecular dynamics simulation[J]. J Mol Graph Model,2011,29:726-739.

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备注/Memo

备注/Memo:
收稿日期:2017-03-22.
基金项目:国家自然科学基金项目(20706029、 20876073、 91434109).
通讯联系人:朱小蕾,博士,教授,研究方向:分子模拟的研究工作. E-mail:xlzhu@njtech.edu.cn
更新日期/Last Update: 2018-03-31