|Table of Contents|

The Mitochondrial Genome of Somanniathelphusa grayi and the Evolution of Gene Order(PDF)

《南京师大学报（自然科学版）》[ISSN:1001-4616/CN:32-1239/N]

Issue:
2022年01期
Page:
86-95
Research Field:
·生态学·
Publishing date:

Info

Title:
The Mitochondrial Genome of Somanniathelphusa grayi and the Evolution of Gene Order
Author(s):
Du Shiyu; Zhang Kangqin; Pan Da; Sun Hongying
(School of Life Sciences,Nanjing Normal University,Jiangsu Key Laboratory for Biodiversity and Biotechnology,Nanjing 210023,China)
Keywords:
Somanniathelphusa grayi; freshwater crab; mitochondrial genome; gene rearrangement
PACS:
Q959
DOI:
10.3969/j.issn.1001-4616.2022.01.013
Abstract:
Somanniathelphusa grayi(Alcock,1909)(=Parathelphusa(Parathelphusa)chongi Wu,1935)was distributed in Yunnan,China and Moung Sal,India. The mitochondrial genome of S.grayi was firstly determined using high-throughput sequencing in this study. The sequenced mitochondrial genome of S.grayi was nearly-complete,17 654 bp in length,containing 37 genes(22 tRNA genes,13 protein-coding genes and 2 rRNA genes). The AT nucleotide content was 72.8%(35.1% for A,18.4% for C,8.8% for G and 37.7% for T). The secondary structures of all tRNA genes were typical cloverleaf structures,except for trnS1-ARN,which lacked a dihydrouridine(DHU)arm. Compared with the brachyuran ground-pattern mitochondrial gene order,the mitochondrial gene order of S.grayi with the positions of six tRNAs(trnR,trnN,trnF,trnP,trnQ and trnC)and one PCGs(nad5)have been rearranged,which could be explained by transposition and TDRL models. The gene order was the same as the previously reported two Somanniathelphusa species. This gene order was shared by other two Somanniathelphusa species from Jiangxi and Hainan Island in China. It is suggested that this gene order pattern is one of the important common characteristics of the genus Somanniathelphusa,and it can provide the new molecular evidence for the systematic classification of Somanniathelphusa grayi,phylogenetic relationships within Somanniathelphusa and the molecular evolution of Gecarcinucidae.

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